PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl009389
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 465aa    MW: 49121.4 Da    PI: 6.5217
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55336995PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-17409PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_175.47.5e-24321383163
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                e+elkr+rrkq+NRe+ArrsR+RK+ae+eeL++kv++L+ eN+aL++el+++ +e++kl++e+
  Pgl009389 321 ERELKRQRRKQSNRESARRSRLRKQAECEELATKVDTLTVENMALRSELNRMAEECKKLTAEN 383
                89*********************************************************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077774.3E-32198IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165964.0E-27137278No hitNo description
Gene3DG3DSA:1.20.5.1701.1E-19315380No hitNo description
SMARTSM003381.5E-22321385IPR004827Basic-leucine zipper domain
PfamPF001702.8E-21321383IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.553323386IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.19E-11324380No hitNo description
CDDcd147026.97E-25326376No hitNo description
PROSITE patternPS000360328343IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    Send to blast
MGTGEEGTPT KPPAKPSSSS QETPTTPVYP DWAAAFQAYY GPGATPPPPA FFASTVGSAP  60
TPHPHMWGGQ PLMPPYGTPL PYPAMYPHGG IYAHPSMPPG ALPYGHYGMP SPGNAEVTTT  120
LALPNAEAEA KSSEGKERNT MKRSKGSLGS LGMITGKGGE GGKATSGSAN EAMSKPGDSG  180
SDGSSEGSEE DNTQNESQVA RKRSFDQMIV DGANAQGTNM SAYNTQTGEP YVASSGHAMG  240
NPISQAVVPL GSVTGKPATS GPITNLNIGM DYWNAAAPGA ITTVKGRGST AGIPTAIVPT  300
TAQLMPPGRD GVPPELWIQD ERELKRQRRK QSNRESARRS RLRKQAECEE LATKVDTLTV  360
ENMALRSELN RMAEECKKLT AENASIMERL KKLHGEDMTT ITEENGSTKI SLQSVKPEGN  420
GHFHDISRGI NSNSTERNEQ RQSETCDSNG KVHTLLDANA RSDTG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1337343RRSRLRK
2337344RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.163710.0root| somatic embryo| stem| vegetative bud
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010244323.11e-125PREDICTED: G-box-binding factor 1-like isoform X2
TrEMBLA0A0C9QT240.0A0A0C9QT24_9SPER; TSA: Wollemia nobilis Ref_Wollemi_Transcript_10978_2763 transcribed RNA sequence
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.12e-71basic region/leucine zipper transcription factor 16