PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl009497
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family G2-like
Protein Properties Length: 447aa    MW: 49816.7 Da    PI: 6.6531
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55342819PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-4949PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like107.19.9e-344599155
    G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
               kprl+Wt eLHerFv+av+qLGG++kAtPk+++++m+vkgLtl+h+kSHLQkYRl
  Pgl009497 45 KPRLKWTAELHERFVDAVSQLGGPDKATPKSVMRVMGVKGLTLYHLKSHLQKYRL 99
               79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.04642102IPR017930Myb domain
Gene3DG3DSA:1.10.10.604.7E-324399IPR009057Homeodomain-like
SuperFamilySSF466892.33E-164499IPR009057Homeodomain-like
TIGRFAMsTIGR015578.3E-2445100IPR006447Myb domain, plants
PfamPF002493.5E-94798IPR001005SANT/Myb domain
PfamPF143797.4E-23146192IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    Send to blast
MEKMYQVKNT VSSNGSVPSH SERSLLLQGS NGPGEMGLVL STDPKPRLKW TAELHERFVD  60
AVSQLGGPDK ATPKSVMRVM GVKGLTLYHL KSHLQKYRLG KHLHMVVNLD NNKNGCSAAA  120
SKTSEMQGAS SAASSMIGAN KTDALQINEA VRMQFEVQRR LHEQIEVQQH LQLRIEAQGK  180
YLQSVLEKAR ETLAGHNLGS VGLEAARAEI SELASKVSSE CLNNAFSSLP EMPSLYKQQQ  240
HMVQAVHSLN QQSQVTDYSM ESCLTSNESS EKNLDRNMQN AGKKRLRTFQ NRNVPFWQTE  300
PREDASLREL SATQLSWEEN LKEDEKFLSS SANPKDSDRN SIPTKGNLRE RTTSFRVQTE  360
ENGYGMPDAR EKQMEVNGSC VGQVIKPEVS RSFSLQEVCQ KGELAGLHRD EDESPSVSFN  420
KLSKLTEELD LNANDDTSIA SNCREFD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A5e-1945102259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B5e-1945102259Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A4e-1945102158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-1945102158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-1945102158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-1945102158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A5e-1945102259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C5e-1945102259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D5e-1945102259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F5e-1945102259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H5e-1945102259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J5e-1945102259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.167260.0stem
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04030.34e-84G2-like family protein