PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl009616
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family BES1
Protein Properties Length: 431aa    MW: 46053.8 Da    PI: 8.2798
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-175a-Picea_glauca-27026PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822137.61.3e-429320728149
     DUF822  28 kiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspsslds 127
                +iyaGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+e+ e+agss s+sp ss++        +sp++sy++sp+sssf sp+s+++
  Pgl009616  93 RIYAGLRMYGNYKLPKHCDNNEVLKALCAEAGWMVEEDGTTYRKGCKPTERIEVAGSS-SVSPASSYH--------PSPAPSYQPSPASSSFASPASSSF 183
                9************************************************888888765.789999999........9***************99999888 PP

     DUF822 128 islasa..asllpvlsvlslvsss 149
                 ++     +sl+p+l++ls++ss+
  Pgl009616 184 EPAGTGaaNSLIPWLKNLSSSSSA 207
                776654669*********987665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056879.4E-4492202IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    Send to blast
XSENLKPGFR HLTCSFGVFA WHAQESSRSN SSSSYSILLR RNIIKASFFS LVRPRSSRGS  60
SSYERQVRGS PNLERTGEIT RRESGEGERS RLRIYAGLRM YGNYKLPKHC DNNEVLKALC  120
AEAGWMVEED GTTYRKGCKP TERIEVAGSS SVSPASSYHP SPAPSYQPSP ASSSFASPAS  180
SSFEPAGTGA ANSLIPWLKN LSSSSSASSS GRLIHGGGSI SAPVTPPLSS PTGRGARAKL  240
DWDAMVKAVA NESNDCPNSG FSTPVSPWSN YPFMASSTPA SPGRHAEMAT QLSNAVVDKG  300
RWMGGIRMMA FSSAGPSSPT FNLLTPAAQL QHGLATEGGR LWTPGQSGVS SPCNNRAGEE  360
ERLLPPFQEG MDASDEFAFG SVAVKPWQGE RIHEECGGEI GSDDLELTLG SFSSSSSKLR  420
SDREPLFSVK E
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A4e-2293151395452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B4e-2293151395452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C4e-2293151395452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D4e-2293151395452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.68110.0cone| root| somatic embryo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010242162.18e-89PREDICTED: BES1/BZR1 homolog protein 4
SwissprotQ9ZV882e-77BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA9NMS90.0A9NMS9_PICSI; Uncharacterized protein
STRINGXP_010242162.13e-88(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.18e-54BES1/BZR1 homolog 4