PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl009794
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 406aa    MW: 43491.1 Da    PI: 7.0118
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55335769PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-39931PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_170.52.6e-22313375163
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                e+elkr+rrkq+NRe+ArrsR RK+ae+eeL+++v+eL++eN +L+ el +l++e++kl se+
  Pgl009794 313 ERELKRQRRKQSNRESARRSRMRKQAECEELARRVEELKNENVSLRTELARLREECEKLSSEN 375
                89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.4E-29395IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165964.1E-28135273No hitNo description
Gene3DG3DSA:1.20.5.1704.5E-18310372No hitNo description
SMARTSM003389.9E-23313377IPR004827Basic-leucine zipper domain
PfamPF001703.7E-20313375IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.978315378IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.42E-11316372No hitNo description
CDDcd147028.29E-24318368No hitNo description
PROSITE patternPS000360320335IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    Send to blast
MGTPTKTTKT PTSQEQTSTS TPMAYPEWAA TIQALYNSGK TPLPPGYFHS AIASSPQAHP  60
YMWGPQHMMP PYGTPPPPYV AMYSHGTMYT HPSMPAGAHL YGSYGMPSSG GSDEITAGPV  120
TASVEGETKS TQAKDRSPLK NTKGSLGSLS MLTGKTNETG KGKTANGVFS QSGESGSESS  180
SEGSDGNSPN GSHSGQKTRF EQGSTEADEA QNGHATSYNG QSANTNSASG SQVTTMNSSP  240
TMAAVAMSLP VTSGTVTGPM TNLNIGMDYW CMAAPTPLSS MRGQLPVSST TAAIIPSAQN  300
MPAMGTELCL QDERELKRQR RKQSNRESAR RSRMRKQAEC EELARRVEEL KNENVSLRTE  360
LARLREECEK LSSENNSLTE QLKNVHDKES RETKVKDELQ KADAEQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1329336RRSRMRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.120150.0root| somatic embryo| vegetative bud
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011626915.11e-119bZIP transcription factor 16 isoform X1
RefseqXP_011626916.11e-119bZIP transcription factor 16 isoform X1
TrEMBLD5AB030.0D5AB03_PICSI; Uncharacterized protein
STRINGXP_010276801.11e-117(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.13e-69basic region/leucine zipper transcription factor 16