PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pgl010215

Organism

Picea glauca

Taxonomic ID

3330

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

G2-like

Protein Properties

Length: 360aa MW: 40523.7 Da PI: 5.6114

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Pgl#S55349833	PU_unref	Unigene	View CDS
PUT-175a-Picea_glauca-44693	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	53.7	4.6e-17	35	66	24	55
G2-like 24 sekAtPktilelmkvkgLtlehvkSHLQkYRl 55 + kAtPk +l+lm+vkgLt++hvkSHLQ+YR+ Pgl010215 35 EXKATPKLVLQLMNVKGLTISHVKSHLQMYRT 66 579****************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
TIGRFAMs	TIGR01557	1.5E-11	33	66	IPR006447	Myb domain, plants
Gene3D	G3DSA:1.10.10.60	2.2E-15	34	68	IPR009057	Homeodomain-like
SuperFamily	SSF46689	8.78E-6	35	69	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence Send to blast
MAEYDSTYAL RFLAFVGLLI SINVLSMQWN ALEDEXKATP KLVLQLMNVK GLTISHVKSH 60 LQMYRTARNN EGGSSESEPK SLPLTQIQNF QKDSIADSQK QSLTDNDHGE DNLDSEFSKT 120 STCSFTTGHK RPLKRLWTGE TDSFSMASER SIQGHADSIE RYPDSRHAGT HGNWAPLREN 180 LTDGLVLLRD QYATSVTSRD NHSTTDQEIN GWREKQSSFQ FSGQVREEDS ATYTLNKEKS 240 NCRSQTSLKV KPWIVSQGNE VEHLVRLLLL RHEQSQAMDK ILEPLTAPSE LQLIERLCPG 300 NGKSENEKPG YETVDSTNLS LGINTAYNEL KTSCPGEKDL LSSKYNSFQD HSDIKLDLTI

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence Send to blast

MAEYDSTYAL RFLAFVGLLI SINVLSMQWN ALEDEXKATP KLVLQLMNVK GLTISHVKSH  60
LQMYRTARNN EGGSSESEPK SLPLTQIQNF QKDSIADSQK QSLTDNDHGE DNLDSEFSKT  120
STCSFTTGHK RPLKRLWTGE TDSFSMASER SIQGHADSIE RYPDSRHAGT HGNWAPLREN  180
LTDGLVLLRD QYATSVTSRD NHSTTDQEIN GWREKQSSFQ FSGQVREEDS ATYTLNKEKS  240
NCRSQTSLKV KPWIVSQGNE VEHLVRLLLL RHEQSQAMDK ILEPLTAPSE LQLIERLCPG  300
NGKSENEKPG YETVDSTNLS LGINTAYNEL KTSCPGEKDL LSSKYNSFQD HSDIKLDLTI

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Pgl.26646	0.0	root

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42630.1	3e-12	G2-like family protein