PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl010393
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family WRKY
Protein Properties Length: 344aa    MW: 37454.4 Da    PI: 9.6157
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55350092PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-35199PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.87.1e-31273331259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                +D+++WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+ +dp+v+++tYegeH h+
  Pgl010393 273 SDEFSWRKYGQKPIKGSPHPRGYYKCSTVrGCPARKHVERALDDPNVLIVTYEGEHSHS 331
                69************************9888****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105333.6E-16222270IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.804.2E-32260331IPR003657WRKY domain
PROSITE profilePS5081130.251267333IPR003657WRKY domain
SuperFamilySSF1182902.75E-26270331IPR003657WRKY domain
SMARTSM007744.1E-37272332IPR003657WRKY domain
PfamPF031062.1E-26274330IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MAVEMLDSRN FMERDVHQAA SATLESVQNL IQLLSRHREM QDEGESQCGF AAEIAANRFK  60
RVVSMLGTTT GHARFRKAPT GSSVLSPKIC PSFEAGHANI SASSSSSHEA FRDSEGFISP  120
APLNNNTLYR PTPLHVQAPP QSPVMDSTPQ QHKIPLLPMN SDYSFMGSRP FKEPVISSPP  180
ISSTNSFISS LTASDPCDKT SMLVRSLSSP TAVGRPPLSS SKKACIHGKP DDLSGKCNTT  240
GGRCHCSSKR KKSRVKRTIR VPAISAKLAD IPSDEFSWRK YGQKPIKGSP HPRGYYKCST  300
VRGCPARKHV ERALDDPNVL IVTYEGEHSH SHSVSENTGL VLDS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-20260330271WRKY transcription factor 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.54790.0root
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5AD760.0D5AD76_PICSI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.16e-61WRKY DNA-binding protein 7