PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl010469
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 339aa    MW: 37408.7 Da    PI: 9.8319
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55350914PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-44171PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.3e-184090155
        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               s+y+GVr +k +g+Wv+e+r+p   +kr r++lg++ t+e Aa+a++ a  +l+g
  Pgl010469 40 SKYRGVRMRK-WGKWVSEVREP---NKRSRIWLGSYSTPEAAARAYDTAVFYLRG 90
               89******99.*******9998...337*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.68E-294099No hitNo description
SuperFamilySSF541711.9E-2140100IPR016177DNA-binding domain
PfamPF008474.2E-124090IPR001471AP2/ERF domain
PROSITE profilePS5103223.3014198IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-3041100IPR001471AP2/ERF domain
SMARTSM003809.3E-3641104IPR001471AP2/ERF domain
PRINTSPR003672.9E-94253IPR001471AP2/ERF domain
PRINTSPR003672.9E-96480IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MEHECSTSEP HGSGGSGGMK RSSTGGGGGV VGGGGNGKGS KYRGVRMRKW GKWVSEVREP  60
NKRSRIWLGS YSTPEAAARA YDTAVFYLRG PSAALNFPDE ARREQQSDFR LLQHGELSPS  120
TIQRRAAEVG AAVDHALQTG PISTQANALR EINQENDIKK ALSSKLSEGN NFKIDAENNM  180
RPQGLSSKPS GNILKFDEKN NTRLQGLNSK PKECNILLFD ETNNTRLQCF NSKPSETNIS  240
KFDEKNNTRL QGFNPRPIKK SDVCKVEGIK EAVEEEKSEQ IRLNLRERDW FANKESVSAA  300
GTALNLRQFA LHSNVPGITD HGGEHPTLEL SVYRPEKRV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1634100474Ethylene-responsive transcription factor ERF096
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.80080.0root| somatic embryo| stem
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23340.13e-37DREB and EAR motif protein 3