PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl010985
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family Trihelix
Protein Properties Length: 306aa    MW: 34309.8 Da    PI: 6.5212
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55346962PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-35748PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix31.74e-1018105186
   trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                +W  + v  L++ + e+ +r  +g lk ++Wee+ +++    +  +  ++ kqC+ek ++l++ryk +++ ++ r s ++ +++++++l+
  Pgl010985  18 EWHPETVSRLLDSYAEKCSRG-KGYLKTKDWEEIVNYVniqyEGSKTAKTMKQCREKVDSLKRRYKVERRKAEFRGSSHV-EWSFYEKLD 105
                599999******999988775.567***************99899999********************999999866666.7******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.6E-1317107No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MGSDDEDFGK ANLSSRCEWH PETVSRLLDS YAEKCSRGKG YLKTKDWEEI VNYVNIQYEG  60
SKTAKTMKQC REKVDSLKRR YKVERRKAEF RGSSHVEWSF YEKLDEIMHS LKRNGNSTAT  120
SDGHSFELVE PLDFEDAFET DRNNHHSFMN NRNGIHGSSN EHNNNRLELI ASEDKGKGLL  180
ESADGLCDVV LNAVGYENGV ELLEPQNCKR RKSSKGLGFD QPGANSQRPP ASSDNNPVQA  240
LADALVGFSE VYSRIEVAKM ELFTKMNLEL ARLRKRRRKN GGSGSVSGFS SVSVSSSSAS  300
SDSEEE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1273277RKRRR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.72750.0root| vegetative bud
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0D6R6K41e-142A0A0D6R6K4_ARACU; Uncharacterized protein