PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl010993
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family G2-like
Protein Properties Length: 306aa    MW: 32540 Da    PI: 8.8321
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S25761397PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-49050PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like107.19.9e-3447101155
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                k+rlrWtpeLH+rFv+av++LGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  Pgl010993  47 KQRLRWTPELHQRFVDAVTELGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 101
                79****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.32344104IPR017930Myb domain
Gene3DG3DSA:1.10.10.604.1E-3246101IPR009057Homeodomain-like
SuperFamilySSF466891.7E-1746102IPR009057Homeodomain-like
TIGRFAMsTIGR015572.1E-2547101IPR006447Myb domain, plants
PfamPF002491.0E-949100IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MYNARKYPAV SLMPPRSQGP EQHIASAVPI TSNNANCSPV ASGMASKQRL RWTPELHQRF  60
VDAVTELGGP DRATPKGVLR VMGVQGLTIY HVKSHLQKYR LPMPVASQDG GGTGGASSSV  120
AKHSLNCLSH DESPSFSSQQ GPPSPDSLGD DESSSGANSP LESPRSGKPP QKKPRLDIMS  180
ASSDQQVCKQ SEKERAGFDA ESLSGSSFQH RDSRPLILNS HHQLPDSHTG LHPFRPSQTA  240
GSAAALPTSP TSQPRNQLLS QTKHAVSSEM SASAHMLQQS SRDAFYPFNS ASSMTDLQEG  300
SGHASG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A3e-2347100154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-2347100154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-2347100154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-2347100154Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.221620.0vegetative bud
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5ACF51e-131D5ACF5_PICSI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-32G2-like family protein