PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl011023
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 304aa    MW: 33065.5 Da    PI: 8.7291
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55336437PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-22857PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.98.1e-212373256
        AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
               +++GVr+++ +gr++AeIrd ++    ++r++lg+f+taeeAa+a+++a+++l+g+
  Pgl011023 23 HFRGVRRRP-WGRFAAEIRDpWK----KTRVWLGTFDTAEEAARAYDNAARALRGA 73
               69*******.**********883....5*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.0E-352386IPR001471AP2/ERF domain
CDDcd000181.67E-282380No hitNo description
SuperFamilySSF541719.81E-222380IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.8E-312380IPR001471AP2/ERF domain
PfamPF008479.5E-142372IPR001471AP2/ERF domain
PROSITE profilePS5103222.8532380IPR001471AP2/ERF domain
PRINTSPR003676.1E-112435IPR001471AP2/ERF domain
PRINTSPR003676.1E-114662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MAPRDELQNC GRGGGQTTAK EVHFRGVRRR PWGRFAAEIR DPWKKTRVWL GTFDTAEEAA  60
RAYDNAARAL RGAKAKTNFA TPRDNQSSSQ TSTVESWSSP KNVVVARSAP PSDASWRNFY  120
SAKYLDARVN GNANGNPGFK EAASAAAWKT IYVNRPVESR AIDLNISALD FGRVDDAATI  180
NARAHETMNG AVALRCPAVN PFDCASQVAL PGKLLLFEGI ASRPEKRQKT CVRSADEKLS  240
LGQQWSALNK GAGSGEEVET RNVQSDCDSS SSVVVDNEAP TEAKRMIPFL DLNLPASAED  300
DAXW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-20779171Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.90690.0stem| vegetative bud
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K0M6X50.0A0A0K0M6X5_PINTB; ERF1
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.13e-25ERF domain protein 12