PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pgl011432

Organism

Picea glauca

Taxonomic ID

3330

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

bZIP

Protein Properties

Length: 287aa MW: 30304.3 Da PI: 10.5336

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-175a-Picea_glauca-12849270	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	52.9	7.9e-17	205	258	5	58
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 +r+rr++kNRe+A rsR+RK+a++ eLe +v eL++eNk+L+k+ ee+ ++ +k Pgl011432 205 RRQRRMIKNRESAARSRARKQAYTVELEAEVTELKEENKELRKKQEEMAEMLKK 258 79****************************************988888887764 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.6E-15	198	258	No hit	No description
SMART	SM00338	1.3E-15	201	269	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.542	203	254	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	6.88E-12	205	256	No hit	No description
CDD	cd14707	3.27E-25	205	259	No hit	No description
Pfam	PF00170	1.1E-14	205	258	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	208	223	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence Send to blast
AQGTASLSLS PSNNALPSQA VLDAINLEAL KASQQQTGWL NNHYRPSIVQ QQQQQQHQQL 60 LQHQQQQQMA DAAAAAMYAS SVKRQGNGAL MGQGNGALMG QGNGALMGQG NGAFMGSPLG 120 GGLGLSPTMG GGIGNGLQGG LGVGLAGLGA TALTIGAASP ANQLSSDGMG TSHGDNSTVS 180 PIPYGLDVGV RGRKRGGPVE KVVERRQRRM IKNRESAARS RARKQAYTVE LEAEVTELKE 240 ENKELRKKQE EMAEMLKKQI IEMMAPSMSQ HLETKTRALK RTLTGPW

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Pgl.872	1e-164	cone

Expression -- Description ? help Back to Top
Source	Description
Uniprot	TISSUE SPECIFICITY: Expressed in roots, leaves, flowers and siliques but not in seeds. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313}.

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003603049.1	7e-59	bZIP transcription factor 46
Refseq	XP_024635171.1	7e-59	bZIP transcription factor 46
Refseq	XP_024635172.1	7e-59	bZIP transcription factor 46
Swissprot	Q9M7Q4	3e-43	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A0D6QWI0	3e-94	A0A0D6QWI0_ARACU; Uncharacterized protein
STRING	AES73300	3e-58	(Medicago truncatula)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	1e-17	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]