PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl011585
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family MYB_related
Protein Properties Length: 281aa    MW: 31556.9 Da    PI: 6.2276
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55351801PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-4311PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.56.2e-0837592346
                     -HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46
                     +W+ Ia+ ++ gRt++++k++w++
        Pgl011585 37 RWSIIAAQLP-GRTDNDIKNYWNT 59
                     6*********.***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.04E-73666IPR009057Homeodomain-like
PROSITE profilePS500906.2023761IPR017877Myb-like domain
CDDcd001676.15E-63761No hitNo description
Gene3DG3DSA:1.10.10.601.8E-113768IPR009057Homeodomain-like
PfamPF002497.7E-63759IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
XGLKMHINNK QAFTLQSVFI AIDWNITPDL RLPVLCRWSI IAAQLPGRTD NDIKNYWNTK  60
LKKKLVGRDK DHQTRRLAPA KQPSQYLQSY CTSEANTSPN IYVPQQQPVA VDHHMNTNYI  120
NGPYSNFGNG IICQLLEQNC GSTIAESSSS SEPDTFQLNR QQVIDQEVSD RNSCLRKLLQ  180
GFEGTPVDNR SNCMTMISTS PPISASSCMN ASEMMQSISH NQYNSDAASH ERAASPVLMD  240
ARHMENHTKI ENSSVAFAQH DDLLFFSASS STEEENYESA W
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.62490.0cone
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5ABB62e-81D5ABB6_PICSI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.12e-16myb domain protein 36