PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl011790
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family G2-like
Protein Properties Length: 272aa    MW: 30123.3 Da    PI: 8.0535
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55334927PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-22196PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like55.61.2e-172322555
    G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55
               ekAtPk +l+lm+v+gLt++hvkSHLQkYR+
  Pgl011790  2 EKATPKXVLKLMNVEGLTIYHVKSHLQKYRI 32
               79****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466899.14E-7232IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.8E-15233IPR009057Homeodomain-like
TIGRFAMsTIGR015576.4E-12233IPR006447Myb domain, plants
PfamPF143793.3E-2371118IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
XEKATPKXVL KLMNVEGLTI YHVKSHLQKY RIAKYMPDQG EGKTSCYAAG KEDKKRNSSD  60
DLPTLDLKAG MQITEALRLQ MEMQKKLHEQ LEVQRALQLK IEEHGKYLQK IFEEQQKTDS  120
SFKSQSLSAP RSSNPFAAAG PLEQSSDVKE DDSRSFPAKR IETVQNKDNS GRGTLLAVGA  180
RDKSLPVVVA DNNSEVAADT EKTPPCGSGS IPDAEDGIKA PPAKRIRSNP DNTCMDKLGP  240
XIDRLGIMNN QPLPEAVFET YISTLSQQRN IL
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.313390.0stem
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Expressed throughout all stages of plant growth. {ECO:0000269|PubMed:26082401}.
UniprotTISSUE SPECIFICITY: Expressed in roots, stems, leaves and fruits (PubMed:18263782). Expressed in the root cap and the root vascular tissues, in the stele of lateral roots, in the mestome sheath cells and the phloem cells of the leaf, in pollen, vascular cylinder of the anther and the veins of the lemma, palea and pistils, and in the xylem and phloem regions of large vascular bundles in node I (PubMed:26082401). {ECO:0000269|PubMed:18263782, ECO:0000269|PubMed:26082401}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in phosphate starvation signaling. Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes. Functionally redundant with PHR2 and PHR3 in regulating Pi starvation response and Pi homeostasis. {ECO:0000250|UniProtKB:Q10LZ1}.
UniProtTranscription factor involved in phosphate starvation signaling (PubMed:18263782, PubMed:26082401). Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes (PubMed:26082401). Functionally redundant with PHR2 and PHR3 in regulating Pi starvation response and Pi homeostasis (PubMed:26082401). {ECO:0000269|PubMed:18263782, ECO:0000269|PubMed:26082401}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Not regulated by Pi starvation. {ECO:0000269|PubMed:18263782, ECO:0000269|PubMed:26082401}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015632603.17e-47protein PHOSPHATE STARVATION RESPONSE 1
SwissprotB8ANX95e-48PHR1_ORYSI; Protein PHOSPHATE STARVATION RESPONSE 1
SwissprotQ10LZ16e-48PHR1_ORYSJ; Protein PHOSPHATE STARVATION RESPONSE 1
TrEMBLB8LKH41e-167B8LKH4_PICSI; Uncharacterized protein
STRINGOS03T0329900-013e-46(Oryza sativa)
STRINGONIVA03G17050.12e-46(Oryza nivara)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.12e-45G2-like family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]