PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl012023
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family C2H2
Protein Properties Length: 262aa    MW: 28983.7 Da    PI: 4.6649
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-175a-Picea_glauca-11749262PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.0001234252321
                ETTTTEEESSHHHHHHHHH CS
    zf-C2H2   3 CpdCgksFsrksnLkrHir 21 
                C+ Cg+ F ++ +L rHi+
  Pgl012023 234 CETCGENFDSRNQLFRHIS 252
                *****************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.349232261IPR007087Zinc finger, C2H2
PROSITE patternPS000280234256IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
XNESYKNTVE DEEEEIENNT EVNSGDEEHE NDDSDMDDEA SLLEAMLKTL SAKRGANNVY  60
RDTARTEADG TDYNYRGNDE ESSSTNQRSR HSNKVEPTTV LAQPDTDDGT QNDXGNFKVR  120
SEARLQEHSE TEKKQPAGAD KNLSTYIVKE VELRSEDISG DRQQGTESPF HVDKQADELE  180
VDKEKGRLPK PAKQSVEKKS ASANTSANDI SAKVKKQVKG KKGKGVAKST GNLCETCGEN  240
FDSRNQLFRH ISGTGHAMLK AS
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.118830.0root| somatic embryo| stem