PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl012195
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 254aa    MW: 28606.8 Da    PI: 8.9662
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55349771PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-6876PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.81.8e-202777256
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
               +++GVr ++ +gr++AeIrdp++   ++r++lg+f+taeeAa+a+++a+++l+g+
  Pgl012195 27 KFRGVRKRP-WGRFAAEIRDPVK---KARVWLGTFDTAEEAARAYDEAARALRGA 77
               89*******.**********654...5*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541719.81E-222785IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.7E-312784IPR001471AP2/ERF domain
SMARTSM003805.6E-362790IPR001471AP2/ERF domain
PfamPF008476.5E-142776IPR001471AP2/ERF domain
PROSITE profilePS5103223.1172784IPR001471AP2/ERF domain
CDDcd000182.69E-302785No hitNo description
PRINTSPR003677.2E-112839IPR001471AP2/ERF domain
PRINTSPR003677.2E-115066IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MLRQQARNAW QDVENVTKVK SSVKEVKFRG VRKRPWGRFA AEIRDPVKKA RVWLGTFDTA  60
EEAARAYDEA ARALRGAKAK TNFAVPCDDQ STSHSSTVES SSGPRNQNDS KKAFNLNGSG  120
TRLVEISVRS PRNRGAKDAL RSGSDIYKRY RRSRVSEVRD WANSPLQNLG LDAAPCHSDC  180
DSSSSVVVDN DVNSGEDLPC DVKPSQERGF DLNLYKEWRS PERQERKMLP DLNLPPCDDD  240
AEDYRDFLAI SLRI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-2027831471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.1680.0needle| root| stem
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0C9S3L62e-69A0A0C9S3L6_9SPER; TSA: Wollemia nobilis Ref_Wollemi_Transcript_15002_2137 transcribed RNA sequence
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53170.11e-18ethylene response factor 8