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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Pgl013071 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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| Family |
LBD |
| Protein Properties |
Length: 218aa MW: 23759.8 Da PI: 7.5023 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| gnl|UG|Pgl#S55334880 | PU_unref | Unigene | View CDS |
| PUT-175a-Picea_glauca-44642 | PU_ref | plantGDB | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 146.6 | 6.9e-46 | 8 | 107 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
+CaaCk+ rrkC+++Cv+apyfp +qp+kfanvhk+FGasnv+kll++l++++reda++sl+yeA+ar+rdPvyG+vgvi+ lq+ql+ql+a+l+ +++e
Pgl013071 8 PCAACKFPRRKCTPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADARLRDPVYGCVGVISILQHQLKQLQADLSNARSE 107
7**********************************************************************************************99886 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 218 aa
Download sequence Send
to blast |
MASSSNSPCA ACKFPRRKCT PECVFAPYFP PDQPQKFANV HKVFGASNVT KLLNELHPHQ 60
REDAVNSLAY EADARLRDPV YGCVGVISIL QHQLKQLQAD LSNARSELSK YINAGITGPL 120
LGGPASNLGI GMGLPGTSRE HIFREQMMES QISSREHQML PNYDQEIVRI SGNAYDPGFA 180
QMNISGSLGP LNPFTQSSRS SSDDRSSARG IGPQINLE
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: In embryo sac, detected as early as the one-nucleus stage. In older embryo sacs, highest expression in antipodal cells. {ECO:0000269|PubMed:17209126}. |
| Uniprot | TISSUE SPECIFICITY: Expressed in leaves, leaf primordia, immature ears, immature tassels, whole ovules, silk and husk leaves. Found on the adaxial side of organs. {ECO:0000269|PubMed:17209126}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Promotes the switch from proliferation to differentiation in the embryo sac. Negative regulator of cell proliferation in the adaxial side of leaves. Regulates the formation of a symmetric lamina and the establishment of venation. Interacts directly with RS2 (rough sheath 2) to repress some knox homeobox genes. {ECO:0000269|PubMed:17209126}. |
