PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl014352
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family Trihelix
Protein Properties Length: 159aa    MW: 17651.2 Da    PI: 4.3447
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S25730084PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix56.86e-1847111266
   trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkike 66 
                W  +e++ L+++r+em+ ++r+++l++  We+vs+k++e g++rs++ Ckek+e++n    k k+
  Pgl014352  47 WATEETQNLLRIRSEMHLKFRDSNLQAVAWEDVSRKLAELGYRRSAQACKEKIEQVNLTSDKAKD 111
                ******************************************************99976666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.24939103IPR017877Myb-like domain
PfamPF138378.7E-1446112No hitNo description
CDDcd122037.95E-1747103No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MQEQIGLGDD SSENQSSFAN RTAIQAETED DDDGIEGEDD EDNDDGWATE ETQNLLRIRS  60
EMHLKFRDSN LQAVAWEDVS RKLAELGYRR SAQACKEKIE QVNLTSDKAK DGKSFMLFGE  120
LEAVCNGGSR VNNGGATNAA LPEEVPAKPE QQNKKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33240.12e-21GT-2-like 1