PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pgl014408

Organism

Picea glauca

Taxonomic ID

3330

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

VOZ

Protein Properties

Length: 155aa MW: 17856.1 Da PI: 6.92

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-175a-Picea_glauca-26170	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	286.5	2.7e-88	1	147	71	217
VOZ 71 qgkevgipecegaatakspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhly 170 q k+vgipecegaatakspwna elfd+ +l+ge +rewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmk+fgglkrsyymdpqps++fewhly Pgl014408 1 QEKSVGIPECEGAATAKSPWNAHELFDMDVLQGEPVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKDFGGLKRSYYMDPQPSTQFEWHLY 100 679*********************************************************************************************** PP VOZ 171 eyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 eyein++da+alyrlelk+v +kk++kgkv d+l+dlq++lg+l+a Pgl014408 101 EYEINDCDACALYRLELKMVCSKKNTKGKVGGDPLVDLQHQLGQLSA 147 *******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence Send to blast
QEKSVGIPEC EGAATAKSPW NAHELFDMDV LQGEPVREWL FFDKPRRAFE SGNRKQRSLP 60 DYSGRGWHES RKQVMKDFGG LKRSYYMDPQ PSTQFEWHLY EYEINDCDAC ALYRLELKMV 120 CSKKNTKGKV GGDPLVDLQH QLGQLSASYL QSYPG

Expression -- Description ? help Back to Top
Source	Description
Uniprot	TISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008383671.1	2e-84	transcription factor VOZ1
Refseq	XP_008383672.1	2e-84	transcription factor VOZ1
Swissprot	Q9SGQ0	7e-81	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A199VTN3	1e-83	A0A199VTN3_ANACO; Transcription factor VOZ1
TrEMBL	A0A2I4HG63	1e-82	A0A2I4HG63_JUGRE; transcription factor VOZ1-like
TrEMBL	A0A498ISJ3	2e-82	A0A498ISJ3_MALDO; Uncharacterized protein
STRING	XP_008383671.1	9e-84	(Malus domestica)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	3e-83	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]