PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl014605
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family WRKY
Protein Properties Length: 144aa    MW: 15875.6 Da    PI: 4.2336
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55349089PU_unrefUnigeneView CDS
PUT-175a-Picea_glauca-8024PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY24.55.3e-0830543559
               EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY 35 kkkversaedpkvveitYegeHnhe 59
                k+vers+++p+++ itY++eHnh+
  Pgl014605 30 PKQVERSRTEPSMLMITYTSEHNHP 54
               59**********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508119.5232556IPR003657WRKY domain
SuperFamilySSF1182906.28E-52854IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.8E-62954IPR003657WRKY domain
PfamPF031062.2E-42954IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MAEIRTEAHQ GIALSQELLS VQQLQGLHCP KQVERSRTEP SMLMITYTSE HNHPPAVNNK  60
KLTEAPSHCT NISRSDPHTD TDMNPAIMES PVMSLLGEAV GGEPADSCIS RSEIEEDEED  120
LFAGLGELPE SSVFFFSRGF FDES
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.276490.0root
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.13e-09WRKY DNA-binding protein 14