PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl015755
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 238aa    MW: 27524.2 Da    PI: 10.2784
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55350348PU_refUnigeneView CDS
PUT-175a-Picea_glauca-500PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.66.2e-0534671955
               HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH 19 afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
               ++++L +++P+    +sk  +  +iL+ ++ Y++ Lq
  Pgl015755 34 RLARLSSIVPNT---KSKNTDEESILRGVISYVQGLQ 67
               789*********...9*******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.2E-63484IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-73484IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MNRRSAWSTK RSLLFLQRHP QKKLSGLLMR KRLRLARLSS IVPNTKSKNT DEESILRGVI  60
SYVQGLQKQV KDIREEIALL QSNIYKTDHE NTARTGTVVT TFDTDNMNKD VMQAYKKEGC  120
QHGDDKEVIQ KKLAQADYGF HTDMLQALHV KEVNEKTFHI QIRCKREAGV LQRLTKILES  180
LQLPMDFYNA NLNTVDGHFI CNVFLKTKVP MKAEMLKQII LDAALQMLNP KIKKFFCC
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.86130.0root
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.22e-10bHLH family protein