PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pgl015909

Organism

Picea glauca

Taxonomic ID

3330

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

bZIP

Protein Properties

Length: 409aa MW: 43770.3 Da PI: 9.9231

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Pgl#S55337982	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	41.7	2.6e-13	323	379	5	61
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 kr +++NR AA ++RqRKk+ +++L+ kv+ eN++L +++ +l++e+ +lk+ Pgl015909 323 KRKNFLERNRQAALKCRQRKKQWLQNLQAKVEFYGHENDQLTSQVTSLREEIVNLKT 379 4445579*********************************************99986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF11786	2.3E-16	99	162	IPR021755	Transcription factor Aft1, HRA domain
Gene3D	G3DSA:1.20.5.170	5.6E-22	316	385	No hit	No description
SMART	SM00338	1.3E-18	318	383	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	12.059	321	384	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.5E-10	323	379	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.06E-19	323	383	No hit	No description
CDD	cd14687	8.60E-30	323	383	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence Send to blast
MPASEVEPAQ RPSSKEQQHI RNQSRSASSE TPSNGSNNKS VNTQPKEQKH HDAEPNPFER 60 SFSGKASGAD SGKQVLPGVA NLTSPSLNLT GVNQAPGGWS SFGSLRNGPL SPAMLLGPSG 120 LGGFDGTLRT GLTPNESSIR TGLTPRGDGI YNMNSPGAAA LFGSNFSTGL TPGGNLNFLS 180 GPGGSNMTEA MFTRPALPQS QLSTVENNSI QMNGNGQDAD AAANGLFLLA QHSQQQQNHN 240 GDLMRKATVN SAKNIESAPN TYGSSSPPSA RRGRRKSSFA EQSPPAEKPA KRGRKQSLKV 300 SDSGNESDDM MDTGRPGETD EEKRKNFLER NRQAALKCRQ RKKQWLQNLQ AKVEFYGHEN 360 DQLTSQVTSL REEIVNLKTM LLAHKDCPVA LNNSLGGIGD MQQLQGVQY

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence Send to blast

MPASEVEPAQ RPSSKEQQHI RNQSRSASSE TPSNGSNNKS VNTQPKEQKH HDAEPNPFER  60
SFSGKASGAD SGKQVLPGVA NLTSPSLNLT GVNQAPGGWS SFGSLRNGPL SPAMLLGPSG  120
LGGFDGTLRT GLTPNESSIR TGLTPRGDGI YNMNSPGAAA LFGSNFSTGL TPGGNLNFLS  180
GPGGSNMTEA MFTRPALPQS QLSTVENNSI QMNGNGQDAD AAANGLFLLA QHSQQQQNHN  240
GDLMRKATVN SAKNIESAPN TYGSSSPPSA RRGRRKSSFA EQSPPAEKPA KRGRKQSLKV  300
SDSGNESDDM MDTGRPGETD EEKRKNFLER NRQAALKCRQ RKKQWLQNLQ AKVEFYGHEN  360
DQLTSQVTSL REEIVNLKTM LLAHKDCPVA LNNSLGGIGD MQQLQGVQY

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Pgl.30652	0.0	needle

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	R4XDK6	1e-145	R4XDK6_TAPDE; Uncharacterized protein
STRING	R4XDK6	1e-145	(Taphrina deformans)