PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl016410
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 396aa    MW: 43936.2 Da    PI: 8.2075
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S40853611PU_unrefUnigeneView CDS
gnl|UG|Pgl#S55346457PU_refUnigeneView CDS
PUT-175a-Picea_glauca-6871PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.96.7e-1566115355
        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  Pgl016410  66 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 115
                9***************988532...5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103210.244129IPR001471AP2/ERF domain
SMARTSM003800.023235IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.6E-7230IPR001471AP2/ERF domain
SuperFamilySSF541716.02E-7231IPR016177DNA-binding domain
SuperFamilySSF541715.56E-1864125IPR016177DNA-binding domain
CDDcd000181.66E-2464125No hitNo description
SMARTSM003807.1E-3365129IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-1865124IPR001471AP2/ERF domain
PROSITE profilePS5103219.20365123IPR001471AP2/ERF domain
PfamPF008479.3E-1066115IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    Send to blast
XYDKEEKAAR AYDLAALKYW GPTTTTNFPI SNYEKELEEM KHMTRQEYVA SLRRKSSGFS  60
RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT  120
NFDMSRYDVK SILASSTLPV GGHVKRIKEA EPSDPSVDGR RNDEDSSTLS SYATSNYSNA  180
TNSKTGHEWP LIAFQNHANQ QRGMWCKQEV QQNQPQDFQV QLHSLHNQKF FQPSLMTTNA  240
TVLHNLMTLQ ESPSVDSNSA GSTSGLFTNI SANNLAGSGL LMASNTPTMH QSMGATDNQT  300
NRVSFGQSEQ GSLKGNSAYE SMNLYGDPYS RGVYYLPQQQ QQQQQIATGT VKAGNYDSNA  360
AAYNNWMTTA PAQALAQRPN GLTVCHAPIF SIWNDS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023872279.11e-133AP2-like ethylene-responsive transcription factor BBM1
TrEMBLA0A088BUC11e-157A0A088BUC1_9SPER; Aintegumenta-like transcription factor baby boom
STRINGEOY097221e-129(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.12e-87AINTEGUMENTA-like 5