PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl016815
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 263aa    MW: 29365.9 Da    PI: 6.398
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S40843018PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.11.6e-1669118255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                +++G+r +k +g+Wv+eIr p+    +  r +lg+++t+e+Aa+a++ a  +l+g
  Pgl016815  69 QFRGIRMRK-WGKWVSEIRMPK----StSRLWLGSYDTPEKAARAYDFAVCCLRG 118
                69*****99.**********84....35*********************999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.9E-2968127IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-1969127IPR016177DNA-binding domain
SMARTSM003801.3E-3469132IPR001471AP2/ERF domain
PROSITE profilePS5103221.53569126IPR001471AP2/ERF domain
CDDcd000185.31E-2969128No hitNo description
PfamPF008471.9E-970118IPR001471AP2/ERF domain
PRINTSPR003674.6E-97081IPR001471AP2/ERF domain
PRINTSPR003674.6E-992108IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
XPHLLPSLAP LFLPSSNPLN NNTPSLRFKH FKLHQHVFTL IPEHPDMAKP SQNQNGRSKP  60
KNCSLKSRQF RGIRMRKWGK WVSEIRMPKS TSRLWLGSYD TPEKAARAYD FAVCCLRGSK  120
AKLNFPHTPP EIPCASSLSP PQIQASAAKF ALEEFRLPLE DEAAFSSSGS GSEAECSNDG  180
QEIWAEKGSA FWDSVLLENL ESGKSPNLND FPPLDESLLE SGKYPNLNDF LPLDELLLES  240
GKSPNLNDFP PLDESLDYFG VHL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1553127273Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA9NQM13e-77A9NQM1_PICSI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.17e-37ERF family protein