PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pgl016836

Organism

Picea glauca

Taxonomic ID

3330

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

VOZ

Protein Properties

Length: 208aa MW: 23674.6 Da PI: 9.4562

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-175a-Picea_glauca-26125	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	285.2	6.7e-88	1	144	69	212
VOZ 69 kvqgkevgipecegaatakspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewh 168 k++gk vgipecegaatakspwna+elfdl +l+ge +rewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmk++gglkrsyymdpqpss+fewh Pgl016836 1 KTRGKAVGIPECEGAATAKSPWNAPELFDLFVLQGEVVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKDLGGLKRSYYMDPQPSSQFEWH 100 789*********************************************************************************************** PP VOZ 169 lyeyeineldalalyrlelklvdekksakgkvskdsladlqkkl 212 lyeye+n++da+alyrlelk+vd+kk++k+kv+ ds+ dlq+k+ Pgl016836 101 LYEYEMNNCDACALYRLELKQVDSKKNTKAKVTGDSVFDLQHKI 144 ***************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence Send to blast
KTRGKAVGIP ECEGAATAKS PWNAPELFDL FVLQGEVVRE WLFFDKPRRA FESGNRKQRS 60 LPDYSGRGWH ESRKQVMKDL GGLKRSYYMD PQPSSQFEWH LYEYEMNNCD ACALYRLELK 120 QVDSKKNTKA KVTGDSVFDL QHKIRLSGEL SVDTKGSTKG RAKLTQKNGS KYPYSAANPV 180 APVSNHFLYG QAVQYGYYVE ETNGYYGT

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Pgl.27436	0.0	root

Expression -- Description ? help Back to Top
Source	Description
Uniprot	TISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011626288.1	1e-103	transcription factor VOZ1
Refseq	XP_011626289.1	1e-103	transcription factor VOZ1
Swissprot	Q9SGQ0	3e-83	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	W1Q0P1	1e-101	W1Q0P1_AMBTC; Uncharacterized protein
STRING	ERN14021	1e-102	(Amborella trichopoda)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-85	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]