PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl017299
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 419aa    MW: 46971.2 Da    PI: 10.0625
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55349347PU_refUnigeneView CDS
PUT-175a-Picea_glauca-15998PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1353.2e-11138175340
                XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 
                  k+ rr+++NReAAr+sR+RKka++++Le    +L++
  Pgl017299 138 NNKVLRRLAQNREAARKSRLRKKAYVQQLESSRIKLKQ 175
                56999************************975444443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0054136189IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.818138180IPR004827Basic-leucine zipper domain
PfamPF001709.9E-8139175IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.11E-7141181No hitNo description
Gene3DG3DSA:1.20.5.1704.8E-7142182No hitNo description
PROSITE patternPS000360143158IPR004827Basic-leucine zipper domain
PfamPF141442.4E-32220295IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    Send to blast
DTEEAQRQGR TRNSSEGRGR MAIGRIPIRP PSRPYSDAFS PSPIFVFMYM HSHLGLASHL  60
QHMNSHYTQY IAKVAPASSP SSHQLDTSGD SFRTQNSPQT GTSKSMEADV KVDNMSEDVN  120
HLRLAISKRS DQEANQPNNK VLRRLAQNRE AARKSRLRKK AYVQQLESSR IKLKQIEQEL  180
DRVKQQGISV SGHLGDHING SGAAAFDMEY GRWVEEQNRQ VRELRASLQA HLTDSDLRVL  240
VDSAIAHYDE LFRMKGAASK LDVFHLMSGM WKTPTERCFM WMGGFRPSEL LKILTPQIEP  300
LTEQQSFAVS SLKLSSQQAE DALSQGMEAL QQSLVDTLAA GSLGAPNVAN YMGQMAMAMG  360
KLGMLESFVH QADNLRQQAL QQMQRILTTR QAARGLLAMG DYFTRLRALS SLWAARPRE
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.22930.0root| stem
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010939598.11e-162transcription factor TGA1-like isoform X2
SwissprotQ415581e-145HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A0D6R5P50.0A0A0D6R5P5_ARACU; Uncharacterized protein
STRINGGSMUA_Achr5P16630_0011e-161(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-139TGACG motif-binding factor 6