PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl017605
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 209aa    MW: 23015.3 Da    PI: 8.2194
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S40845593PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_165.77.9e-2160122163
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                e+elkre+rkq+NRe+A+rsR++K+ e+e L+ kv++L++eNkaL++el+ + ke++kl se+
  Pgl017605  60 ERELKREKRKQSNRESAKRSRAKKQLECEGLTAKVETLTSENKALRNELNLIAKESEKLASEN 122
                89*********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.0E-1755119No hitNo description
SMARTSM003381.9E-1860124IPR004827Basic-leucine zipper domain
PfamPF001703.1E-1860122IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.05962125IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.94E-1163119No hitNo description
CDDcd147022.53E-1665114No hitNo description
PROSITE patternPS0003606782IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
XPTTNLNIGM DMYNAPAQGF VTPVNGRRGT IGIVSTIAPT TAQLMPGHDG APSELCIQDE  60
RELKREKRKQ SNRESAKRSR AKKQLECEGL TAKVETLTSE NKALRNELNL IAKESEKLAS  120
ENVSLMELLR NLQGQDRVGD SERNGPRETQ SRFTQPGGNH YPQVLYKISN SSSSQRDEQK  180
ESEMSDSTGK AHAVLEANAQ SDTVAADKR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011627689.14e-36light-inducible protein CPRF3 isoform X2
RefseqXP_020530216.14e-36light-inducible protein CPRF3 isoform X2
RefseqXP_020530218.14e-36G-box-binding factor 1 isoform X3
TrEMBLA0A0D6QXL03e-86A0A0D6QXL0_ARACU; Uncharacterized protein
STRINGERN175242e-35(Amborella trichopoda)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.12e-29basic region/leucine zipper transcription factor 16