PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl017726
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 244aa    MW: 26443.2 Da    PI: 10.1254
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55341280PU_refUnigeneView CDS
PUT-175a-Picea_glauca-43950PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.56.7e-1852100355
        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                ykG+r+++ rg+W+AeIrdp++      ++lg+f+tae+Aa+a++a ++k++g
  Pgl017726  52 YKGIRQRP-RGKWAAEIRDPRK---GVMVWLGTFDTAEKAARAYDAEARKIRG 100
                9*******.8*********943...3*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.107.5E-2951109IPR001471AP2/ERF domain
PROSITE profilePS5103221.60151108IPR001471AP2/ERF domain
SuperFamilySSF541712.88E-2051109IPR016177DNA-binding domain
CDDcd000184.98E-3051110No hitNo description
SMARTSM003806.3E-3451114IPR001471AP2/ERF domain
PfamPF008471.1E-1052100IPR001471AP2/ERF domain
PRINTSPR003671.3E-85263IPR001471AP2/ERF domain
PRINTSPR003671.3E-87490IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    Send to blast
MGGGTIVPGF TPSGLLAARQ ECPLAGGSPA THPSQCKEVA KTARGRKRKN IYKGIRQRPR  60
GKWAAEIRDP RKGVMVWLGT FDTAEKAARA YDAEARKIRG KKAKVNFADD LPPPKKNKVV  120
KKPEDKMTEG SPIKTCTHLP QCSARSDIVQ GQKSNRLATA KSALSTTIEG DGADFMDVPT  180
LLIMGISEGS HQDGNSLLDC KAIKPNQSNS SEESVMDSYI GLLRFLYLED RTDQSTGRVD  240
INGT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A7e-1752107359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
5wx9_A7e-17521071571Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.22370.0needle| somatic embryo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006604931.11e-34ethylene-responsive transcription factor RAP2-2
RefseqXP_028219357.11e-34ethylene-responsive transcription factor RAP2-2-like
TrEMBLA0A0B2PPP43e-33A0A0B2PPP4_GLYSO; Ethylene-responsive transcription factor 1
TrEMBLK7N0G83e-33K7N0G8_SOYBN; Uncharacterized protein
STRINGGLYMA19G45200.25e-34(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.13e-23ethylene-responsive element binding protein