PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pgl017801

Organism

Picea glauca

Taxonomic ID

3330

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

WRKY

Protein Properties

Length: 155aa MW: 16714.1 Da PI: 6.4939

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Pgl#S40902237	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	34.8	3.3e-11	3	31	30	58
TT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 30 agCpvkkkversaedpkvveitYegeHnh 58 +gCpvkk+v+r+aedp+vv+ tYegeH+h Pgl017801 3 PGCPVKKQVQRCAEDPTVVVATYEGEHTH 31 59**************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00774	3.7E-5	1	33	IPR003657	WRKY domain
PROSITE profile	PS50811	11.497	1	31	IPR003657	WRKY domain
SuperFamily	SSF118290	2.09E-8	3	31	IPR003657	WRKY domain
Pfam	PF03106	4.9E-8	3	31	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	2.3E-10	3	31	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence Send to blast
MAPGCPVKKQ VQRCAEDPTV VVATYEGEHT HCPSMRRANF VADNLFIPVS MAIPEISTSS 60 SFPTVTLDLT GNRPNPGLQF RPPNLEAGSF QQLALFDQNQ YSSTMQELVT SMKADPNFTA 120 ALAVAIAGSL LNLGTSIQRM PKFPPAKQCI DGSTQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A482CVK9	7e-52	A0A482CVK9_9SPER; WRKY164
STRING	XP_004487422.1	2e-20	(Cicer arietinum)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	5e-18	WRKY family protein