PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pgl017910
Organism
Picea glauca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family WRKY
Protein Properties Length: 205aa    MW: 22934.5 Da    PI: 7.0003
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Pgl#S55334877PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY33.21.1e-10184205122
                ---SS-EEEEEEE--TT-SS-E CS
       WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                ldDgy+WrKYGqK+vk+s +pr
  Pgl017910 184 LDDGYKWRKYGQKVVKNSLHPR 205
                59*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.6E-12169205IPR003657WRKY domain
SuperFamilySSF1182901.83E-9176205IPR003657WRKY domain
PROSITE profilePS5081113.46179205IPR003657WRKY domain
PfamPF031067.0E-7185205IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MDEANPRSSG CMQTAALTTL MEQQPMRVFQ QLQLNAFPSY QLPSNEVLPT MAQLEPPRGF  60
ISRADHHLNH SVSSCFDEKD DQFLMDEGSH LEAGGGYTHD DAQYTSLPGC GLITSSSTQP  120
SNYSHHNFPG CTHQSASNTG DISPAARWEG SSSWPGSEKV KVKVKRKLRE PRFCFQTRSD  180
VDVLDDGYKW RKYGQKVVKN SLHPR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1162168KVKRKLR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pgl.313480.0stem
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44745.12e-23WRKY family protein