PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Phvul.001G011800.1

Common Name

PHAVU_001G011800g

Organism

Phaseolus vulgaris

Taxonomic ID

3885

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus

Family

bZIP

Protein Properties

Length: 157aa MW: 18140.6 Da PI: 10.4779

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Phvul.001G011800.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.1	1.4e-11	30	88	4	62
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 k+ +rkq+NR +ArrsR RK++ ++ L+ + L++eN L +l+ ++ kl+++ Phvul.001G011800.1 30 QKKKKRKQSNRDSARRSRMRKQKHMDDLTAQLQRLQTENNLLFTQLNITTQYHLKLQAQ 88 699************************************98887777666666666655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	7.1E-10	21	75	No hit	No description
SMART	SM00338	7.5E-16	27	91	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.576	29	92	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.27E-11	31	83	No hit	No description
Pfam	PF00170	5.9E-9	31	77	IPR004827	Basic-leucine zipper domain
CDD	cd14702	6.01E-18	32	80	No hit	No description
PROSITE pattern	PS00036	0	34	49	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 157 aa Download sequence Send to blast
MASFSGTSSI STKQIQSSGS EEDLQRLMDQ KKKKRKQSNR DSARRSRMRK QKHMDDLTAQ 60 LQRLQTENNL LFTQLNITTQ YHLKLQAQNS ILMAQKTELT QTLHSLNHII NLINKTTPTN 120 DNHHCYNNIN NNFMNPMHMP CLNQPIVATA DNMFLW*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	30	35	KKKKRK
2	43	50	RRSRMRKQ

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Phvul.001G011800.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007160724.1	1e-112	hypothetical protein PHAVU_001G011800g
TrEMBL	V7CTM8	1e-110	V7CTM8_PHAVU; Uncharacterized protein
STRING	XP_007160724.1	1e-111	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF613	34	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	1e-30	basic leucine-zipper 44

Link Out ? help Back to Top
Phytozome	Phvul.001G011800.1
Entrez Gene	18640029