PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.001G101100.4
Common NamePHAVU_001G101100g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family G2-like
Protein Properties Length: 218aa    MW: 24336.4 Da    PI: 6.7466
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.001G101100.4genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like50.35.4e-1618462755
             G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55
                        AtPk +l++m+v+gLt++hvkSHLQkYRl
  Phvul.001G101100.4 18 ATPKGVLRVMGVPGLTIYHVKSHLQKYRL 46
                        9***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.51E-61846IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.8E-151847IPR009057Homeodomain-like
TIGRFAMsTIGR015573.9E-111847IPR006447Myb domain, plants
PfamPF143796.6E-2578124IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
MTVLWMPLHN LVDQIVGATP KGVLRVMGVP GLTIYHVKSH LQKYRLAKYL PESPADDSKD  60
EKRNSGDSFS GADSSPGMPI NDALRMQMEV QKRLHEQLEV QKQLQMRIEA QGKYLQKIIE  120
EQQKLGSTLT TSETLPLSHD KHTHPHSEAS GSSDALASPL SPHKKQRIDD VFTASHVRKT  180
EQKNDCNVGQ LDPNLYDDTG FGFDLETKKD EHKESGQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.001G101100.4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ0073110.0HQ007311.1 Glycine max cultivar Jidou11 MYB transcription factor (PHR1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007161826.11e-161hypothetical protein PHAVU_001G101100g
SwissprotQ9SJW04e-53PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLV7CX121e-160V7CX12_PHAVU; Uncharacterized protein
STRINGXP_007161823.11e-143(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.15e-53G2-like family protein