PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.002G007400.1
Common NamePHAVU_002G007400g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 337aa    MW: 37460.4 Da    PI: 8.0035
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.002G007400.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.11.1e-11170215555
                         HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         h ++Er+RR+++ +++  L  l+P +     kK++Ka++L  A++Y+k+Lq
  Phvul.002G007400.1 170 HIIAERKRREKLSQSLIALAALIPGL-----KKMDKASVLGDAIRYVKELQ 215
                         899***********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.589165214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.8E-15170226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.3E-9170215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-15170226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.23E-11170219No hitNo description
SMARTSM003532.9E-13171220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MDASEPNWFS DFETEDCNLF RQCQLEIEDD EELLSLEIAS ALENFPPPQH QQPFSSESHT  60
SYSETSNLVR PAKQLKTNLS SWNSSPITDK HFSPNISSST SSSPTSQIML PVENTQLHGI  120
VSAVLSPQQN KGVSVSPPET RKRSSENPNY ETKSPKSQGS FKTSGHGGDH IIAERKRREK  180
LSQSLIALAA LIPGLKKMDK ASVLGDAIRY VKELQERQKT LEENKNRDDV GSVVMVNKAR  240
LSYRDGCGRA SLPRVEARVS EKDVLLRIHC QKQKGLLLKI LVEIQNLHLF VVNSSVLSFG  300
DSIIDITIVA QMGTDYKLTI NELVKNLRRA TLKSMS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1173178ERKRRE
2174179RKRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.002G007400.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007156672.10.0hypothetical protein PHAVU_002G007400g
TrEMBLV7CIG10.0V7CIG1_PHAVU; Uncharacterized protein
STRINGXP_007156672.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF110691238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-49bHLH family protein