PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.002G203300.1
Common NamePHAVU_002G203300g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 248aa    MW: 27128.7 Da    PI: 8.8751
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.002G203300.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.75.8e-14163216255
                         XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                         + l+++rr++kNRe+A rsR+RK+a++ eLe  v +Le+eN +L +e  e++ +
  Phvul.002G203300.1 163 ATLQKQRRMIKNRESAARSRERKQAYTSELEYLVHQLEQENARLLNEEAEMRRQ 216
                         5799**************************************998665555444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.6E-13162226IPR004827Basic-leucine zipper domain
PfamPF001701.8E-12163218IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.289164216IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.94E-10166217No hitNo description
CDDcd147075.86E-19166206No hitNo description
Gene3DG3DSA:1.20.5.1701.0E-13167218No hitNo description
PROSITE patternPS000360169184IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MASSKVVSTN PDLPRDSSIS PLTSLLLSDL HHPTSMDDLL KSITPVAAKT VDDVWKEIVA  60
GAHPHNPAAN ASGDGNGANV NATAPESYEA ITLEDFLTKA GAVREEDVRG VLPPSSSSPL  120
PFPLPLPAEG SSSSVEPFGN GVAPSNSVHK GKRRVVEEPV DKATLQKQRR MIKNRESAAR  180
SRERKQAYTS ELEYLVHQLE QENARLLNEE AEMRRQRKKQ LFEFIIPVEE MPKPKKKLRR  240
VNSAQSL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1232238KPKKKLR
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.002G203300.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150340.0AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007159037.11e-180hypothetical protein PHAVU_002G203300g
TrEMBLV7CQ141e-179V7CQ14_PHAVU; Uncharacterized protein
STRINGXP_007159037.11e-179(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.11e-31bZIP family protein