PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.002G322000.1
Common NamePHAVU_002G322000g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family ARR-B
Protein Properties Length: 450aa    MW: 50026.3 Da    PI: 6.1312
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.002G322000.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like66.25.9e-21191244155
             G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                         k+r++W++eLHe F+ a+++ GG++ A+Pk+ile+m+v+gL + hv+SHLQk+R 
  Phvul.002G322000.1 191 KKRIVWSTELHELFLIAMDKAGGED-AVPKKILEAMNVPGLERGHVASHLQKHRK 244
                         68*******************9987.***************************96 PP
2Response_reg56.12.1e-19231331110
                         EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH.ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHH CS
        Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd.pDlillDiempgmdGlellkeireeepklpiivvtahgeeedaleal 90 
                         vl++d + +v+e +++a++++ y++++  ++ ++a  l ++k+ ++lil+ + mp mdG+e+l+  ++e+ ++p +++++ ++++ + +a+
  Phvul.002G322000.1  23 VLVIDSDLSVLEYITKACTHSSYQVIPCSESLPAANFLRERKElIHLILIEVHMPLMDGYEFLQFVKQEQINVPLVLMSTDNNNASVMKAI 113
                         89*********************888877777777655555559*********************************************** PP

                         HTTESEEEESS--HHHHHHH CS
        Response_reg  91 kaGakdflsKpfdpeelvka 110
                         ++Ga d+  Kp +++++v++
  Phvul.002G322000.1 114 EVGACDYWNKPLEEKRIVNM 133
                         ***************99985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521723.56E-2419142IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23002.9E-2720156No hitNo description
SMARTSM004485.6E-1321134IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011029.91922138IPR001789Signal transduction response regulator, receiver domain
PfamPF000727.8E-1623133IPR001789Signal transduction response regulator, receiver domain
CDDcd001562.87E-1624138No hitNo description
SuperFamilySSF466891.7E-15189248IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.5E-22189248IPR009057Homeodomain-like
TIGRFAMsTIGR015575.7E-19191244IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    Send to blast
MAQISSPAIA TQHTLPVSPM LNVLVIDSDL SVLEYITKAC THSSYQVIPC SESLPAANFL  60
RERKELIHLI LIEVHMPLMD GYEFLQFVKQ EQINVPLVLM STDNNNASVM KAIEVGACDY  120
WNKPLEEKRI VNMWAYVLKS STSEDTKQKD IGSQKDDDRR RVKSDNSEFA SSVVDFDVGE  180
SKNANPPSRK KKRIVWSTEL HELFLIAMDK AGGEDAVPKK ILEAMNVPGL ERGHVASHLQ  240
KHRKYLRKKK EMEMSLASGN TEPERIHLQS STSLTDFHHP GFTGNMGPKG EQHFPAEEAL  300
AHHQNSPLAT FSNMAMAENS PLFMRNIMQQ YHHQIHPFNF HSSSITISGN PAFVPQNYNS  360
GINMNNGLTS LQSIQGGNSI GEVIQNQDTT GASVYYPQSQ NAGLSSYAVR YSDATEFSSQ  420
SLSTDIDNAT TEEQLILLTM DESITRPAS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A9e-14188248262ARR10-B
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.002G322000.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007160437.10.0hypothetical protein PHAVU_002G322000g
TrEMBLV7CU460.0V7CU46_PHAVU; Uncharacterized protein
STRINGXP_007160437.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2069324
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01760.12e-48response regulator 14