PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.003G156300.1
Common NamePHAVU_003G156300g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family WRKY
Protein Properties Length: 505aa    MW: 54728.2 Da    PI: 9.374
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.003G156300.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.53.7e-25194250259
                         --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                         +DgynWrKYGqK+vk+ + +rsYYrCt+++C +kk +e++++ ++v+ei+Y++eH h+
  Phvul.003G156300.1 194 SDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCFAKK-IECCDHSGHVIEIVYKSEHSHD 250
                         7********************************98.*********************7 PP
2WRKY96.41.9e-30367423359
                         -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                         Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e + ++ ++v+itY+g H+h+
  Phvul.003G156300.1 367 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIESAVDNSDAVIITYKGVHDHD 423
                         9*******************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-21187252IPR003657WRKY domain
PROSITE profilePS5081118.292188252IPR003657WRKY domain
SuperFamilySSF1182901.28E-20191252IPR003657WRKY domain
SMARTSM007744.9E-24193251IPR003657WRKY domain
PfamPF031061.4E-17195250IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.1E-31350425IPR003657WRKY domain
PROSITE profilePS5081131.869360425IPR003657WRKY domain
SuperFamilySSF1182906.67E-27361425IPR003657WRKY domain
SMARTSM007743.2E-34365424IPR003657WRKY domain
PfamPF031062.1E-23367422IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    Send to blast
MAERRSPQAL PEPHPKPNDS DREPHDANQT QRLTESPSAA ESQRVELRSS DERRTESNLE  60
TLGGAVTSSV QTLAVQHHRS DDLQGSSAAS NSSGKAESKE TVAPPEKEII QRGAAQPLPT  120
QTNRLQLSVC STPLSELPPA SVTQSLSSVS SPTAPKQKLS TPKVNNAHLP EVDKKNPSGG  180
KALSAVSVAR SSASDGYNWR KYGQKQVKSP TGSRSYYRCT HSDCFAKKIE CCDHSGHVIE  240
IVYKSEHSHD PPRKTNSLRE NKFLSASEPI VENSVPDQPV RLLKDPDPSI SSKESLQGPC  300
SSDKKRPNSS SISGNGKVIL KEEHVNEPEP KKRMKKGDLT DMDSPVKPGK KPKFVIHAAG  360
DVGISGDGYR WRKYGQKMVK GNPHPRNYYR CTSAGCPVRK HIESAVDNSD AVIITYKGVH  420
DHDMPVPKKR HGPPSAPLVA AAAPTSMNSL QVKKPDSPHN KKVSTQWSVD TEGELTGEAL  480
ELGGEKAMES ARTLLSIGFE IKPC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-25353425274WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.003G156300.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0312280.0KT031228.1 Glycine max clone HN_CCL_111 WRKY transcription factor (Glyma02g36510.1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007154886.10.0hypothetical protein PHAVU_003G156300g
SwissprotP595831e-132WRK32_ARATH; Probable WRKY transcription factor 32
TrEMBLV7CC730.0V7CC73_PHAVU; Uncharacterized protein
STRINGXP_007154886.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51983456
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.11e-110WRKY DNA-binding protein 32