PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Phvul.003G181500.1

Common Name

PHAVU_003G181500g

Organism

Phaseolus vulgaris

Taxonomic ID

3885

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus

Family

bZIP

Protein Properties

Length: 211aa MW: 23965.9 Da PI: 7.0798

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Phvul.003G181500.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.8	5.4e-14	103	162	4	63
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +++ +r+ +NRe+ArrsR RKk++ie L+ v+ L++ N++L +++ l + ++ +++ Phvul.003G181500.1 103 DRKKKRMFSNRESARRSRMRKKQQIELLQYHVDHLQTLNHQLSEKIIYLLECNQQIHQQN 162 7899****************************************9977777666666655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.6E-12	100	164	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.231	102	165	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	9.4E-13	103	162	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	3.3E-13	104	161	No hit	No description
SuperFamily	SSF57959	3.38E-11	104	160	No hit	No description
CDD	cd14702	2.90E-14	105	153	No hit	No description
PROSITE pattern	PS00036	0	107	122	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence Send to blast
MECNEDDELH VAPYASLTQC FRYLSPTQKP ILTSTMETDE GHTLTHLDQP HSLHHIPFFY 60 SQLHLPSTSH NPIQVPLHKS SPNTSSNSNN NNNSDEAKAL LDDRKKKRMF SNRESARRSR 120 MRKKQQIELL QYHVDHLQTL NHQLSEKIIY LLECNQQIHQ QNAQLKEKVS SLQVALSDLL 180 VPEGGAEQPH HIPNGFLVEP STRAIASSIV *

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Phvul.003G181500.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015034	0.0	AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007155196.1	1e-154	hypothetical protein PHAVU_003G181500g
TrEMBL	V7CD57	1e-153	V7CD57_PHAVU; Uncharacterized protein
STRING	XP_007155196.1	1e-154	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF13044	24	30

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60830.1	4e-29	basic leucine-zipper 70

Link Out ? help Back to Top
Phytozome	Phvul.003G181500.1
Entrez Gene	18635290