 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Phvul.003G236300.1 |
| Common Name | PHAVU_003G236300g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
|
| Family |
GRAS |
| Protein Properties |
Length: 471aa MW: 52463.8 Da PI: 5.9548 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Phvul.003G236300.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 293.6 | 5.2e-90 | 53 | 467 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsPi 90
++lL++cA+a++++d +laq++L+ l+++aspdgd++qRla+ f++AL ar a+ ++ l++ +t+ + ++++++ +l f++++P+
Phvul.003G236300.1 53 EQLLVHCANAIQTNDVTLAQQILWVLNNIASPDGDSNQRLASSFLRALTARAAQ-TKMLVAVADHDRTNLSIDTHKFSVIELanFVDLTPW 142
79***************************************************9.44444333333333333555555556588******* PP
GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetgerLakfAeelgvpfe 177
++f++ +aN a+l a+eg + +Hi+D+++++++Q p+L++a+asR e +p +++T+ ++ + ++ e+g +L +fA++ +v +e
Phvul.003G236300.1 143 HRFGFTAANAAVLAATEGFSVIHIVDLSLTHCMQIPTLIDAIASRHEVTPLIKLTVADATCRDippmLDLSYDELGAKLINFARSRNVVME 233
*********************************************************9987779987788999****************** PP
GRAS 178 fnvl...vakrledleleeLrvkp...........gEalaVnlvlqlhrll...........................desvsleserdev 227
f+v+ + + ++ +e+Lrv++ Eal++n++++lh+++ + +s++s r+ +
Phvul.003G236300.1 234 FRVVsstYQDGFAG-LIEQLRVQQqhfvyaaeprsCEALVINCHMMLHYIPdeslhaipetdlasllydsssaaassaVSVTSTSSLRSLF 323
***74432333333.489999988888889999999***************************************98533334444788** PP
GRAS 228 LklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrer 318
Lk +++l P+vv++v+++ad++s++++ r+ +a++y + +d++++ lpr s++r+++E+ + ++i+nv+a+eg er+er e + +W++r
Phvul.003G236300.1 324 LKSLRGLDPTVVILVDEDADLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEAD-ICWKIENVIAHEGIERVERVEPKTRWEQR 413
*************************************************************.***************************** PP
GRAS 319 leeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
+++a F+ v++s++ ++++k +l +++ g+ ++ e++ ++l+Wk++++v++SaW
Phvul.003G236300.1 414 MKNANFQGVAFSDDSVAEVKGMLDEHA-AGWGLKREDEHILLTWKGHNVVFASAW 467
***************************.999************************ PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 471 aa
Download sequence Send
to blast |
MTQFTPQLPP FHQITPLPNP TMNKNQIPRT RPWPAGFPTS KALTNFGDAN CMEQLLVHCA 60
NAIQTNDVTL AQQILWVLNN IASPDGDSNQ RLASSFLRAL TARAAQTKML VAVADHDRTN 120
LSIDTHKFSV IELANFVDLT PWHRFGFTAA NAAVLAATEG FSVIHIVDLS LTHCMQIPTL 180
IDAIASRHEV TPLIKLTVAD ATCRDIPPML DLSYDELGAK LINFARSRNV VMEFRVVSST 240
YQDGFAGLIE QLRVQQQHFV YAAEPRSCEA LVINCHMMLH YIPDESLHAI PETDLASLLY 300
DSSSAAASSA VSVTSTSSLR SLFLKSLRGL DPTVVILVDE DADLTSNNLV CRLRSAFNYL 360
WIPYDTVDTF LPRGSKQRQW YEADICWKIE NVIAHEGIER VERVEPKTRW EQRMKNANFQ 420
GVAFSDDSVA EVKGMLDEHA AGWGLKREDE HILLTWKGHN VVFASAWLPA *
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015034 | 0.0 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |
