PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.003G266100.1
Common NamePHAVU_003G266100g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 156aa    MW: 17758 Da    PI: 10.7603
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.003G266100.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.82.6e-1486138456
                         XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                         + r  r++kNRe+A rsR+RK+a++ eL++k+++L++eN +L+ + + l++++
  Phvul.003G266100.1  86 DMRNARLMKNRESAARSRARKQAYLIELKQKIEQLQEENARLIRQQQLLRETA 138
                         66889**************************************9999999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.2E-584149IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.36985136IPR004827Basic-leucine zipper domain
CDDcd147075.18E-1787141No hitNo description
SuperFamilySSF579594.0E-1088138No hitNo description
Gene3DG3DSA:1.20.5.1703.4E-1388138No hitNo description
PfamPF001701.8E-1088137IPR004827Basic-leucine zipper domain
PROSITE patternPS00036091105IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
MEDVWNGINS TALSEHNTTH ISKGAKFQDF LAGPFNPSPV TALTLSTRSS EYLPLHKDLQ  60
LLHTASKTEP FAHPFSNERA PPASRDMRNA RLMKNRESAA RSRARKQAYL IELKQKIEQL  120
QEENARLIRQ QQLLRETATN QWKRGNLSRT YTAPF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.003G266100.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150342e-73AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007156193.11e-112hypothetical protein PHAVU_003G266100g
TrEMBLV7CDD61e-110V7CDD6_PHAVU; Uncharacterized protein
STRINGXP_007156193.11e-111(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1699577
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17770.27e-15basic region/leucine zipper motif 27