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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Phvul.003G291500.2 |
| Common Name | PHAVU_003G291500g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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| Family |
GRAS |
| Protein Properties |
Length: 518aa MW: 56941.4 Da PI: 5.2431 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Phvul.003G291500.2 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 451.8 | 4.3e-138 | 153 | 508 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91
lv+ L++cAeav++++l+ a+al++++ la ++ +m+++a+yf+eALa+r++r +p +++ s++l++ f+e++P++
Phvul.003G291500.2 153 LVHSLMACAEAVENNNLAVAEALVKQIGFLAVSQVGSMRKVATYFAEALARRIYR-------VFPLQQS----LSDSLQI--HFYETCPYI 230
689****************************************************.......3344444....5666555..4******** PP
GRAS 92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlv 182
kf+h+taNqaIlea++g++rvH+iDf+i+qG+QWpaLlqaLa Rp+gpp +R+Tg+g+p++++++ l+e+g++La++Ae ++v+fe++ +v
Phvul.003G291500.2 231 KFAHFTANQAILEAFQGKSRVHVIDFGINQGMQWPALLQALALRPGGPPAFRLTGIGPPAADNSDHLQEVGWKLAQLAEMINVRFEYRGFV 321
******************************************************************************************* PP
GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdslea 273
a++l+dl+ ++L+++ +E +aVn+v++ h+ll++++++e+ vL++v++++P++++vveqe++hn+ sF +rf+e+l+yys+lfdsle
Phvul.003G291500.2 322 ANSLADLDASMLDLRDDEPVAVNSVFEFHKLLARPGAIEK----VLSVVRQIRPEILTVVEQESNHNGLSFRDRFTESLHYYSTLFDSLEG 408
****************************************....*********************************************99 PP
GRAS 274 klpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWk 363
+ + + +++ +++++lg++i+nvvaceg++r+erhetl++Wr+r+++ GF+pv+l+++a kqa++ll+ ++ +dgyrvee+sg+l+lgW+
Phvul.003G291500.2 409 S--PVNPQDKAMSEVYLGKQICNVVACEGTDRVERHETLNQWRSRFSSTGFSPVHLGSNAFKQASMLLALFAgGDGYRVEENSGCLMLGWH 497
9..67899999999***************************************************************************** PP
GRAS 364 drpLvsvSaWr 374
+r+L+++SaW+
Phvul.003G291500.2 498 TRALIATSAWQ 508
**********6 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0006808 | Biological Process | regulation of nitrogen utilization |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0009863 | Biological Process | salicylic acid mediated signaling pathway |
| GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
| GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
| GO:0010187 | Biological Process | negative regulation of seed germination |
| GO:0010218 | Biological Process | response to far red light |
| GO:0010233 | Biological Process | phloem transport |
| GO:0042538 | Biological Process | hyperosmotic salinity response |
| GO:2000033 | Biological Process | regulation of seed dormancy process |
| GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process |
| GO:0005634 | Cellular Component | nucleus |
| Sequence ? help Back to Top |
| Protein Sequence Length: 518 aa
Download sequence Send
to blast |
MKRERQNLAS TAGTSSSGYS TGKSNLWEDE GGMDELLAVV GYKVRSSDMA EVAQKLERLE 60
EAMGNVQDGL KELSDDAVHY NPSDISNWLQ TMLSNFDSLT PEEPDKGYDL KAIPGKAIYD 120
GGVGTAPNPK RLKSAESTQA FVVVDSQENG IRLVHSLMAC AEAVENNNLA VAEALVKQIG 180
FLAVSQVGSM RKVATYFAEA LARRIYRVFP LQQSLSDSLQ IHFYETCPYI KFAHFTANQA 240
ILEAFQGKSR VHVIDFGINQ GMQWPALLQA LALRPGGPPA FRLTGIGPPA ADNSDHLQEV 300
GWKLAQLAEM INVRFEYRGF VANSLADLDA SMLDLRDDEP VAVNSVFEFH KLLARPGAIE 360
KVLSVVRQIR PEILTVVEQE SNHNGLSFRD RFTESLHYYS TLFDSLEGSP VNPQDKAMSE 420
VYLGKQICNV VACEGTDRVE RHETLNQWRS RFSSTGFSPV HLGSNAFKQA SMLLALFAGG 480
DGYRVEENSG CLMLGWHTRA LIATSAWQLA EKPVVAV*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AB304457 | 0.0 | AB304457.1 Phaseolus vulgaris PvGAI1 mRNA for DELLA protein, complete cds. |
