PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.004G047600.1
Common NamePHAVU_004G047600g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 201aa    MW: 22459.3 Da    PI: 10.1917
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.004G047600.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.67.4e-15119170252
                         XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHH CS
              bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke.leel 52 
                         + ++++rr++kNRe+A rsR+RK+a++ eLe kv++Le+eN+ L +e +e+ 
  Phvul.004G047600.1 119 ATIQKQRRMIKNRESAARSRERKQAYTMELEYKVQQLEQENTHLVNEeAENR 170
                         5789**************************************9974303333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.7E-12118182IPR004827Basic-leucine zipper domain
PfamPF001702.5E-13119176IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.151120172IPR004827Basic-leucine zipper domain
CDDcd147074.49E-17122183No hitNo description
SuperFamilySSF579592.31E-11123167No hitNo description
Gene3DG3DSA:1.20.5.1707.7E-14123174No hitNo description
PROSITE patternPS000360125140IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
MDDFKSIISM PTAAATAATT VDNIWNKIVA GAHPHHPAAA GDYNGGAGDY RGASALEFYE  60
GSPMENLSSS SSLPVSFSLP LPFHAQGPSS VEPFGMGTAS SNLVHRGRRR VVEEPMDKAT  120
IQKQRRMIKN RESAARSRER KQAYTMELEY KVQQLEQENT HLVNEEAENR RQRRKQLMET  180
IIPVEVMRKP RKKFGRQNSF *
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.004G047600.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007151451.11e-149hypothetical protein PHAVU_004G047600g
TrEMBLV7C2C41e-147V7C2C4_PHAVU; Uncharacterized protein
STRINGXP_007151451.11e-148(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03970.13e-25G-box binding factor 4