PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.004G053300.1
Common NamePHAVU_004G053300g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 304aa    MW: 33586.8 Da    PI: 7.8293
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.004G053300.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_152.21.3e-16233282555
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                         +r +r++kNRe+A rsR+R++a+++eLe kvk+Le eN++L+ +l+e++k 
  Phvul.004G053300.1 233 RRHKRMIKNRESAARSRARRQAYTQELEIKVKQLEVENERLR-RLNEIEKA 282
                         699***************************************.99999886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.5E-13226275No hitNo description
SMARTSM003384.7E-11229297IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.013231275IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.44E-10233278No hitNo description
PfamPF001701.9E-13233278IPR004827Basic-leucine zipper domain
PROSITE patternPS000360236251IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MGSQGGAVQE PNTTTSTTPL VRQGSLYNLT LDELHNQLGN LGKPLGSMNL DELLKSVWIA  60
EVRGEAPGLD FGGGDADMQD GPAASASFLN PQGSLTLSRD LSRKTVDEVW RDMQLKKGTC  120
RDKKTQERQP TMGEMTLEDF LVKAGVVPDS DGVSSQHGHW MQYQHPSVQH QNMVVGGYVA  180
GHAIQQPFHT TLNLVLDAAY SEPASLVGAL SDTQTPSRKR LASGDLVERT VERRHKRMIK  240
NRESAARSRA RRQAYTQELE IKVKQLEVEN ERLRRLNEIE KALPSEPPPE PKQQLRRTSS  300
AIF*
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.004G053300.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311431e-108KT031143.1 Glycine max clone HN_CCL_31 BZIP transcription factor (Glyma19g20090.1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007151513.10.0hypothetical protein PHAVU_004G053300g
SwissprotQ9LES34e-89AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLV7BZZ70.0V7BZZ7_PHAVU; Uncharacterized protein
STRINGXP_007151513.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132034105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.11e-73ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]