PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.004G070200.1
Common NamePHAVU_004G070200g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 319aa    MW: 35954.5 Da    PI: 7.0565
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.004G070200.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.22.3e-11205245954
                         HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                 HLH   9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                         ErrRR+++N+++  Lr+++Pk +      K++ a+iL  A++Y+++L
  Phvul.004G070200.1 205 ERRRRKKLNDRLYMLRSIVPKiS------KMDRASILGDAIDYLREL 245
                         *********************66......***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.377196245IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.37E-12199249No hitNo description
SuperFamilySSF474596.94E-16199263IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.1E-13202251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.4E-15204258IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.3E-9205245IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MLPTKTLTRT FRVPWLEPQQ SDVVTGTGVL FHCKTMLDSD WYVDQSHHEF LQNDAFLLNS  60
LDSSSSSSLP QQHHMVPQKP SFSSFFEANG NGFLDGGFDF GEESCFLASF SGNVPSLNAK  120
FAERRDRAAV RSLYELSPPT LYRKRMERGG GREEEEGLNY ESDEYGKLLE NVFDANDNDD  180
NENRVGGGDH KGKKKGMPAK NLMGERRRRK KLNDRLYMLR SIVPKISKMD RASILGDAID  240
YLRELLQRIN DLHNELETSK LDSSLPPSAS FHPVTPTVPT LPCRVKEELC ATTLPSPKHQ  300
STKVFVCHSA KLYFFPVS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1192210KKKGMPAKNLMGERRRRKK
2204211ERRRRKKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.004G070200.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007151725.10.0hypothetical protein PHAVU_004G070200g
TrEMBLV7C0S30.0V7C0S3_PHAVU; Uncharacterized protein
STRINGXP_007151725.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26744.43e-53bHLH family protein