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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Phvul.004G084800.1 |
| Common Name | PHAVU_004G084800g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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| Family |
GRAS |
| Protein Properties |
Length: 464aa MW: 53384.9 Da PI: 6.4455 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Phvul.004G084800.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 296 | 9.9e-91 | 80 | 461 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91
l++lLl+ A+ +++++ ++ + L +l +++s gd++qR++ayf+ +Laarl+ s y+ + ++ts +ee+ a++ ++ vsP++
Phvul.004G084800.1 80 LIHLLLSTATSIDERNYCATLENLIELYQTVSLIGDSVQRVVAYFADGLAARLLTRKSPFYDMVMEEPTS----EEEFLAFTDLYRVSPYY 166
689****************************************************999999988777775....788889999******** PP
GRAS 92 kfshltaNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel..g 173
+f+h+taNqaIlea e+e + +H+iDfd+s+G+QWp+L+q+L++++ ++ slRiTg+g+ + +el+et+ rL +f + + +
Phvul.004G084800.1 167 QFAHFTANQAILEAYEEEeernnKSLHVIDFDVSYGFQWPSLIQSLSEKAtsSNRISLRITGFGN----NLKELQETEARLVSFSKGFsnH 253
****************9988887889***********************9655566*********....99*************9965227 PP
GRAS 174 vpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyy 264
+ fef+ l+ + +l +Lr +++E+laVnlv l +l + ++ +++L+lv slsP +vv+v qe ++n ++Fl rf+e+l+y+
Phvul.004G084800.1 254 LVFEFQGLLRG---SSRLINLRKRKNETLAVNLVSYLNTLT-SFMK----VSDTLELVHSLSPSIVVLVKQEGSRNLKTFLSRFTESLHYF 336
88999997333...3345699999***********999997.3333....346************************************** PP
GRAS 265 salfdsleaklpreseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve.. 352
+a+fdsl+ lp es er +E++llg+ei++++ + + e++e+W+ r+e+ GF ++s+k + qaklll++ y ++
Phvul.004G084800.1 337 AAMFDSLDDCLPLESTERLRIEKKLLGKEIKSMLNYDMDGvDCPKYERMETWKTRMENHGFVGRKISSKCVIQAKLLLKMRTHY-YPLQfe 426
**********************************988776457899********************************986522.333321 PP
GRAS 353 ee............sgslv.lgWkdrpLvsvSaWr 374
ee +g ++ lgW++r L++vSaW+
Phvul.004G084800.1 427 EEggsggfrvserdEGRVIsLGWQNRFLLTVSAWQ 461
11333333333334555558**************6 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 464 aa
Download sequence Send
to blast |
MEDSEGEELL NLTLSVAAGR ERKKKERTRD DNTNSLVIPM KSREGYEGKI FRLLQMRELM 60
LREDHRRKGV VEDVNNGLPL IHLLLSTATS IDERNYCATL ENLIELYQTV SLIGDSVQRV 120
VAYFADGLAA RLLTRKSPFY DMVMEEPTSE EEFLAFTDLY RVSPYYQFAH FTANQAILEA 180
YEEEEERNNK SLHVIDFDVS YGFQWPSLIQ SLSEKATSSN RISLRITGFG NNLKELQETE 240
ARLVSFSKGF SNHLVFEFQG LLRGSSRLIN LRKRKNETLA VNLVSYLNTL TSFMKVSDTL 300
ELVHSLSPSI VVLVKQEGSR NLKTFLSRFT ESLHYFAAMF DSLDDCLPLE STERLRIEKK 360
LLGKEIKSML NYDMDGVDCP KYERMETWKT RMENHGFVGR KISSKCVIQA KLLLKMRTHY 420
YPLQFEEEGG SGGFRVSERD EGRVISLGWQ NRFLLTVSAW QPI*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015044 | 0.0 | AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari. |
