PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.004G124200.1
Common NamePHAVU_004G124200g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 186aa    MW: 21278.2 Da    PI: 8.1348
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.004G124200.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.11.1e-11857455
                        HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH  4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                        +h+e Er+RR+++ +   +Lr+llP       ++K s ++ + +A++YI++Lq
  Phvul.004G124200.1  8 MHKETERQRRQEMGKLCTNLRSLLPLeY---IKGKRSASDHVHEAMNYINHLQ 57
                        7*************************77...*********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000835.80E-9261No hitNo description
SuperFamilySSF474595.23E-15373IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.027456IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-10670IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.1E-9857IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00841062IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MDENKKWMHK ETERQRRQEM GKLCTNLRSL LPLEYIKGKR SASDHVHEAM NYINHLQDKV  60
KQLQAKRDAL LKVSNFSSTG PENESSCTTH HLPPLVFVHP FPGGLEIMCS YSFRRSVFPM  120
SRLLDILHKE GLSVVSTTSI RRDGRFIHTI QSENPNHPNM IDTDYSELQI KLMEALSSSI  180
DDSIS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.004G124200.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0927391e-139BT092739.1 Soybean clone JCVI-FLGm-11L13 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007152369.11e-137hypothetical protein PHAVU_004G124200g
TrEMBLV7C4R01e-136V7C4R0_PHAVU; Uncharacterized protein
STRINGXP_007152369.11e-136(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.12e-34bHLH family protein