PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.005G022600.1
Common NamePHAVU_005G022600g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family ARR-B
Protein Properties Length: 158aa    MW: 18109.3 Da    PI: 3.9656
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.005G022600.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like31.34.6e-10112157450
             G2-like   4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHL 50 
                         ++W++eL   F +a+ ++ G e   P  ile+m+v+gL le+v SHL
  Phvul.005G022600.1 112 VQWSTELNFLFHQALIKI-GLEISKPEDILEAMNVPGLELEDVESHL 157
                         79****************.9**************************9 PP
2Response_reg27.21.9e-1015853110
                         CTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHHH CS
        Response_reg  53 mpgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvka 110
                         mp ++G+e+++ +++++ ++p i+++a g+ + + + +++Ga d+ +Kp ++++lv++
  Phvul.005G022600.1   1 MPLINGFEFMEFLNKKKINIPLIMMSADGSWPSIMKSIEVGACDYWVKPLSEQRLVNM 58 
                         999****************************************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23001.3E-13175No hitNo description
CDDcd001561.77E-9156No hitNo description
PfamPF000726.7E-8158IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF521727.26E-13164IPR011006CheY-like superfamily
PROSITE profilePS5011018.999163IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF466894.84E-5111157IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.6E-9111157IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-8112157IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    Send to blast
MPLINGFEFM EFLNKKKINI PLIMMSADGS WPSIMKSIEV GACDYWVKPL SEQRLVNMWI  60
DVVKNNIKDE EQKDIGSQKD DDRTRVVDDC DDDRTRVTDD SDDDDSDSAD SVQWSTELNF  120
LFHQALIKIG LEISKPEDIL EAMNVPGLEL EDVESHLE
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.005G022600.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007148885.11e-111hypothetical protein PHAVU_005G022600g, partial
TrEMBLV7BSE31e-110V7BSE3_PHAVU; Uncharacterized protein (Fragment)
STRINGXP_007148885.11e-111(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58080.11e-16response regulator 18