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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Phvul.005G032800.1 |
| Common Name | PHAVU_005G032800g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
|
| Family |
GRAS |
| Protein Properties |
Length: 429aa MW: 48234.3 Da PI: 5.453 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Phvul.005G032800.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 333.8 | 3.1e-102 | 24 | 427 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93
+ L +cA++++sg+ +a++ L + ++asp+gd+mqR+a+y+ e+La +++++ +++ ka++ s+t ++see + k+f+++ P+lk
Phvul.005G032800.1 24 RILNACAKFIESGSIMNADTGLDYIAHIASPYGDAMQRVATYISEGLAFQVLKNLQGVPKAVNLSKTM--STSEEQLVKKTFYDLYPFLKT 112
7899**********************************************************999987..577888899************ PP
GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
+++++ +aI ea+ege++vH+iD+++s +QW+ L++ L + +++p l+iTg+++ ++e lee++ +L+ A++l+ +++fn+ +++
Phvul.005G032800.1 113 AYVITSHAIAEAIEGEDEVHVIDLGASDAAQWIYLMHRLKESQKSPTVLKITGIHE----KEEILEEVATQLRVEAKSLHFNLQFNA-IVS 198
********************************************************....99*************************.79* PP
GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrll.............................................desvsleserdevLkl 230
+le+l+leeL v++gE l++++vlqlh+ll + s++ ++L+
Phvul.005G032800.1 199 TLENLDLEELPVQKGEPLVISSVLQLHTLLatddamvcirssqeepmhqrtfaemlgkqktnpssessllqlplcATSTK----MMHFLNG 285
*********************************************************************96555544444....556**** PP
GRAS 231 vkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerlee 321
+++l+P+v+vv+eqe++ n +s+ er+ +al++y alf++le++++++ eri +Er llg+ei+n+va eg er+erhe++e+W +le+
Phvul.005G032800.1 286 LWKLQPRVMVVTEQESNVN-GSLTERVDKALDFYGALFNCLESTVSTTLVERIIMERTLLGQEIKNIVAGEGVERKERHEKFETWIPKLEM 375
******************6.689******************************************************************** PP
GRAS 322 aGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
aGF++ ++s++ ++qa l+ ++ +gy++ e+++l+ +W+d+pL+svSaW+
Phvul.005G032800.1 376 AGFEKKHISHHGMMQATKQLHGYG-NGYKLCPENNCLFVCWNDKPLFSVSAWT 427
***********************9.9**************************6 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 429 aa
Download sequence Send
to blast |
MDTDSPYPWL KDMNGEDRDK YLARILNACA KFIESGSIMN ADTGLDYIAH IASPYGDAMQ 60
RVATYISEGL AFQVLKNLQG VPKAVNLSKT MSTSEEQLVK KTFYDLYPFL KTAYVITSHA 120
IAEAIEGEDE VHVIDLGASD AAQWIYLMHR LKESQKSPTV LKITGIHEKE EILEEVATQL 180
RVEAKSLHFN LQFNAIVSTL ENLDLEELPV QKGEPLVISS VLQLHTLLAT DDAMVCIRSS 240
QEEPMHQRTF AEMLGKQKTN PSSESSLLQL PLCATSTKMM HFLNGLWKLQ PRVMVVTEQE 300
SNVNGSLTER VDKALDFYGA LFNCLESTVS TTLVERIIME RTLLGQEIKN IVAGEGVERK 360
ERHEKFETWI PKLEMAGFEK KHISHHGMMQ ATKQLHGYGN GYKLCPENNC LFVCWNDKPL 420
FSVSAWTV*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |
