PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.005G124200.1
Common NamePHAVU_005G124200g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 292aa    MW: 32566.7 Da    PI: 5.813
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.005G124200.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.43.1e-13238280547
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                         +r+rr+ kNRe+A rsR+R++a++ eLe +   L+ eN++Lk 
  Phvul.005G124200.1 238 RRQRRMLKNRESAARSRARRQAYTVELEAELNHLKDENEKLKT 280
                         69***************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.8E-13232283No hitNo description
SMARTSM003389.5E-9234289IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.714236280IPR004827Basic-leucine zipper domain
PfamPF001703.3E-11238281IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-11238282No hitNo description
PROSITE patternPS000360241256IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0033613Molecular Functionactivating transcription factor binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MNFQQSEQEV PLQDTEAAFS QLNQQNSVLS LTLEEVSGKN GKSLGSMSMD EFIASIWNAE  60
EIPPLPVYEE AAKNKSVAPE PTIPQPGSFS VPPPICKKTV DEVWSQIQKS QPKQHNEADK  120
NETLEKQPTF GEITLEEFLV KAGVVRESTL FTTILPQNNF GNIPSNVPFN TSYILIGTTG  180
SNVPSNRFEP HPMLPQNNTL VLRNLPTAPA THSQNLGESS GKGKKRIISG PPEEVIERRQ  240
RRMLKNRESA ARSRARRQAY TVELEAELNH LKDENEKLKT VLAADELKRK EA
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.005G124200.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007150073.10.0hypothetical protein PHAVU_005G124200g, partial
TrEMBLV7BVM40.0V7BVM4_PHAVU; Uncharacterized protein (Fragment)
STRINGXP_007150073.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20923374
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44460.15e-53bZIP family protein