PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Phvul.006G071300.1

Common Name

PHAVU_006G071300g

Organism

Phaseolus vulgaris

Taxonomic ID

3885

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus

Family

bZIP

Protein Properties

Length: 202aa MW: 23163.1 Da PI: 5.7607

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Phvul.006G071300.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	28.2	4.1e-09	43	89	4	50
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 + + rr+ +NR+ ++rsRq+Kk+ +e Lee+vk Le +L+ e Phvul.006G071300.1 43 DPKLRRMFSNRLYSQRSRQKKKKIVEDLEERVKILEDLLLRLQPEQA 89 6789*******************************987666665555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.7E-4	40	104	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	3.7E-7	45	91	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.99E-9	45	99	No hit	No description
Gene3D	G3DSA:1.20.5.170	4.1E-8	46	99	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence Send to blast
NQSILLMEQS EGMGKEKMIL DSSSNAEQSQ AEKDDKGPVE QMDPKLRRMF SNRLYSQRSR 60 QKKKKIVEDL EERVKILEDL LLRLQPEQAY YQNQLHNLMM EEQTMLHEME YLKRKALLRE 120 AEDEKNRNKK SMLEEVKQDQ LLHLNSDPLA GVSFDTSSYQ GNGAQSSYIA PEARQMGVAA 180 VADRHQTDLA RATAQNPNPN P*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Phvul.006G071300.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007146807.1	1e-145	hypothetical protein PHAVU_006G071300g, partial
TrEMBL	V7BQE3	1e-144	V7BQE3_PHAVU; Uncharacterized protein (Fragment)
STRING	XP_007146807.1	1e-145	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF16149	3	5

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11260.1	4e-06	bZIP family protein

Link Out ? help Back to Top
Phytozome	Phvul.006G071300.1
Entrez Gene	18628048