PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.007G064300.1
Common NamePHAVU_007G064300g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 246aa    MW: 27793.5 Da    PI: 8.4924
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.007G064300.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.61.7e-1174126155
                         CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +++ h e+Er+RR+++ +  + Lr+llP ++   ++K s ++   ++v+YI++Lq
  Phvul.007G064300.1  74 KKMVHREIERKRRQEMATLHASLRSLLPLSF--IKGKRSISDQMSETVNYINHLQ 126
                         6889*************************65..*********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.68E-871130No hitNo description
SuperFamilySSF474594.58E-1272145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.10373125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.2E-1074142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-874126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.002879131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MFPLQRGNEL VIQFSNGLQP QHKISKDLLL DDHNIDNSPL VAYSDKKLRT SHPNKLFYAP  60
ETSHENSTQE ESAKKMVHRE IERKRRQEMA TLHASLRSLL PLSFIKGKRS ISDQMSETVN  120
YINHLQKNIK ELSDKRDKLK KKLPINSTLE SRQNKHESSG FTVHQNSSGA VGIEISGFSE  180
EGVSLSKLLE LVLEEGLEVV CCLSTKVNGR LLHSLQCEVE NSDSVDLSEL RRKFSNVIAS  240
FRVSE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18186ERKRRQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.007G064300.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311160.0KT031116.1 Glycine max clone HN_CCL_215 bHLH transcription factor (Glyma10g38630.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007143341.11e-178hypothetical protein PHAVU_007G064300g
TrEMBLV7BCN51e-177V7BCN5_PHAVU; Uncharacterized protein
STRINGXP_007143341.11e-178(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25400.12e-24bHLH family protein