PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.007G064400.1
Common NamePHAVU_007G064400g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 261aa    MW: 29842.4 Da    PI: 9.0141
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.007G064400.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH247.1e-0882131455
                         HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                         +h e+E++RR+++       r+llP       ++K s ++   +  +YIk+L+
  Phvul.007G064400.1  82 MHREIEKQRRQEMTRLCTHFRSLLPLqY---IKGKRSISDLMHEGSNYIKHLE 131
                         7*************************66...********************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.33E-776135No hitNo description
SuperFamilySSF474591.01E-1077145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.56678130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.6E-780146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.0E-582131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MNPLHPSHGL YSQITTDDYC SLPIQTTTLQ NQILCDPMMD GSALIPCTGQ METTKGKQRQ  60
KLPAWRNEDY KITTIDENKK WMHREIEKQR RQEMTRLCTH FRSLLPLQYI KGKRSISDLM  120
HEGSNYIKHL ENKVKLLEAK RDKFKKLSNL IPVVSDSGSF GTTHFPICVL VHPFPGGAQI  180
KCSYSFRKYV FSLSRVIDMV LKEGLDVVNC TSTKTDDRFI HTIRLEVPHM MTGTNYTELQ  240
RKLVEAISSS SSTSLEEISI *
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.007G064400.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150411e-127AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007143342.10.0hypothetical protein PHAVU_007G064400g
TrEMBLV7BFR60.0V7BFR6_PHAVU; Uncharacterized protein
STRINGXP_007143342.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.11e-29bHLH family protein